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  5. Transcript_contig_54847

Transcript_contig_54847 (54847)


Aliases : 54847

Description : FF domain; Protein kinase domain [Interproscan].


Gene families : OG_01_0000547 (OrthoFinder) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54847
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001086.27 tig00001086_g6861.t1 Enzyme classification.EC_2 transferases.EC_2.7... 0.02 OrthoFinder
Cpa|evm.model.tig00020800.31 tig00020800_g13749.t1 Serine/threonine-protein kinase STN8, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00021127.26 tig00021127_g18704.t1 Serine/threonine-protein kinase STN7, chloroplastic... 0.01 OrthoFinder
Transcript_contig_56943 56943 Protein kinase domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR002713 FF_domain 726 775
IPR000719 Prot_kinase_dom 51 238
No external refs found!