1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000704.46

Cpa|evm.model.tig00000704.46 (tig00000704_g3333.t1)


Aliases : tig00000704_g3333.t1

Description : Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii


Gene families : OG_01_0001969 (OrthoFinder) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.46
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Cre12.g489750 30791845, FAP52 Cilia- and flagella-associated protein 52... 0.12 OrthoFinder
Cz10g27060.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0420s00008.1 33194860 WD40 repeat [Interproscan]. 0.03 OrthoFinder
EOD09656 No alias WD40 repeat-containing protein [Ensembl]. 0.05 OrthoFinder
EOD22832 No alias WD40 repeat-containing protein [Ensembl]. 0.01 OrthoFinder
EOD25992 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002500050.1 MICPUN_104754, 104754 Partial 0.09 OrthoFinder
XM_002508620.1 MICPUN_106110, 106110 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003057788.1 MicpuC2_33090, 33090 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003063079.1 MicpuC2_71081, 71081 Flagella-associated protein FAP196-like protein 0.04 OrthoFinder
lcl|BLLF01000676.1_cds_GFH14005.1_8482 HaLaN_09977, GFH14005 WD40 repeat [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01001236.1_cds_GFH18011.1_12488 HaLaN_14744, GFH18011 Cilia- and flagella-associated protein 52 0.03 OrthoFinder
lcl|BLLF01002628.1_cds_GFH24774.1_19251 HaLaN_22628, GFH24774 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0001534 radial spoke IEP Enrichment
BP GO:0003341 cilium movement IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0060294 cilium movement involved in cell motility IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 95 133
IPR001680 WD40_repeat 313 347
IPR001680 WD40_repeat 51 89
IPR001680 WD40_repeat 358 391
IPR001680 WD40_repeat 485 516
IPR001680 WD40_repeat 439 475
No external refs found!