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  5. Transcript_contig_54729

Transcript_contig_54729 (54729)


Aliases : 54729

Description : SET domain; Pre-SET CXC domain [Interproscan].


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54729
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000488.8 tig00000488_g1344.t1 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder
Cpa|evm.model.tig00001073.18 tig00001073_g6826.t1 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cre17.g746247 30782096 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder
Cz03g13010.t1 No alias PWWP domain; SET domain; AWS domain [Interproscan]. 0.01 OrthoFinder
EOD12158 No alias FY-rich, C-terminal; SET domain [Interproscan]. 0.01 OrthoFinder
EOD14692 No alias SET domain [Interproscan]. 0.01 OrthoFinder
OT_03G01110.1 No alias High mobility group box domain; Zinc finger, PHD-finger;... 0.03 OrthoFinder
OT_13G03070.1 No alias AWS domain; SET domain [Interproscan]. 0.01 OrthoFinder
OT_14G01610.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
OT_18G00210.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_12G04100.1 No alias SET domain [Interproscan]. 0.01 OrthoFinder
PTI_22G01600.1 No alias SET domain; PWWP domain; Zinc finger, PHD-finger;... 0.02 OrthoFinder
Sro2775_g336830.1 Contig927.g9706 Lysine N-methyltransferase, H3 lysine-4 specific 0.02 OrthoFinder
Sro72_g039840.1 Contig1459.g13383 36 and H4 lysine-20 specific 0.01 OrthoFinder
Sro84_g045070.1 Contig220.g2640 36 and H4 lysine-20 specific 0.01 OrthoFinder
Vocar.0006s0306.1 32894358 PHD-finger; SAND domain; PHD-zinc-finger like domain... 0.01 OrthoFinder
Vocar.0044s0031.1 32896567 Zinc finger, CW-type; SET domain; AWS domain [Interproscan]. 0.01 OrthoFinder
XM_002505429.1 MICPUN_63548, 63548 Set domain protein 0.02 OrthoFinder
XM_003059701.1 MicpuC2_59369, 59369 Set domain protein 0.01 OrthoFinder
lcl|BLLF01002303.1_cds_GFH23572.1_18049 HaLaN_21201, GFH23572 Histone-lysine N-methyltransferase 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60593.1_4707 PRW60593 Histone-lysine N-methyltransferase ASHH2 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495860.1_1858 KAA8495860 Histone-lysine N-methyltransferase, H3 lysine-4 specific 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR041355 Pre-SET_CXC 422 459
IPR001214 SET_dom 494 598
No external refs found!