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  5. Transcript_contig_54642

Transcript_contig_54642 (54642)


Aliases : 54642

Description : Palmitoyltransferase, DHHC domain [Interproscan].


Gene families : OG_01_0000087 (OrthoFinder) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54642
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000455.38 tig00000455_g1028.t1 Probable protein S-acyltransferase 12 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020713.6 tig00020713_g13403.t1 Probable protein S-acyltransferase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g38320.t1 No alias Ankyrin repeat-containing domain; Palmitoyltransferase,... 0.01 OrthoFinder
XM_002507413.1 MICPUN_113401, 113401 Palmitoyltransferase (TIP1) 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57544.1_8318 PRW57544 Putative S-acyltransferase 7 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001594 Palmitoyltrfase_DHHC 162 302
No external refs found!