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  5. Transcript_contig_54595

Transcript_contig_54595 (54595)


Aliases : 54595

Description : Glutamine amidotransferase domain; Peptidase M20; Peptidase M20, dimerisation domain; WD40 repeat [Interproscan].


Gene families : OG_01_0000631 (OrthoFinder) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54595
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.63 tig00000057_g86.t1 No description available 0.02 OrthoFinder
Transcript_contig_61248 61248 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 680 714
IPR001680 WD40_repeat 646 674
IPR001680 WD40_repeat 455 485
IPR002933 Peptidase_M20 1015 1368
IPR011650 Peptidase_M20_dimer 1130 1301
No external refs found!