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  5. Transcript_contig_54552

Transcript_contig_54552 (54552)


Aliases : 54552

Description : Citrate synthase [Interproscan].


Gene families : OG_01_0001552 (OrthoFinder) Phylogenetic Tree(s): OG0001552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54552
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.4 tig00000711_g3365.t1 Lipid metabolism.lipid degradation.fatty acid... 0.01 OrthoFinder
Cre03.g149100 30787831, CIS2 Lipid metabolism.lipid degradation.fatty acid... 0.04 OrthoFinder
Cz02g27080.t1 No alias Citrate synthase [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold21.298 21.298 Citrate synthase; Glutamyl/glutaminyl-tRNA synthetase,... 0.02 OrthoFinder
lcl|BLLF01001389.1_cds_GFH18987.1_13464 HaLaN_15872, GFH18987 Citrate synthase 0.01 OrthoFinder
lcl|BLLF01001896.1_cds_GFH21735.1_16212 HaLaN_19096, GFH21735 Citrate synthase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495898.1_1896 KAA8495898 Citrate synthase 3, peroxisomal 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 63 430
No external refs found!