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Aliases : 54481
Description : CCR4-NOT transcription complex subunit 1, TTP binding domain; CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819; CCR4-NOT transcription complex subunit 1, CAF1-binding domain; CCR4-NOT transcription complex subunit 1, HEAT repeat [Interproscan].
Gene families : OG_01_0002549 (OrthoFinder) Phylogenetic Tree(s): OG0002549_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_54481 | |
| Cluster | HCCA: Cluster_165 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000767.19 | tig00000767_g3963.t1 | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder | |
| Cz07g24160.t1 | No alias | CCR4-NOT transcription complex subunit 1, TTP binding... | 0.01 | OrthoFinder | |
| Sro944_g222970.1 | Contig4161.g31789 | CCR4-NOT transcription complex subunit 1 | 0.02 | OrthoFinder | |
| XM_003057741.1 | MicpuC2_47070, 47070 | CCR4-Not complex, Not1 subunit, domain of unknown... | 0.02 | OrthoFinder | |
| lcl|BLLF01000651.1_cds_GFH13783.1_8260 | HaLaN_09729, GFH13783 | CCR4-NOT transcription complex subunit 1, CAF1-binding... | 0.01 | OrthoFinder | |
| lcl|BLLF01000651.1_cds_GFH13784.1_8261 | HaLaN_09730, GFH13784 | CCR4-NOT transcription complex subunit 1 | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59980.1_6158 | PRW59980 | CCR4-NOT transcription complex subunit 1 isoform X2 | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004096 | catalase activity | IEP | Enrichment |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006020 | inositol metabolic process | IEP | Enrichment |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Enrichment |
| BP | GO:0006066 | alcohol metabolic process | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006473 | protein acetylation | IEP | Enrichment |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016573 | histone acetylation | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0019751 | polyol metabolic process | IEP | Enrichment |
| MF | GO:0019899 | enzyme binding | IEP | Enrichment |
| MF | GO:0019902 | phosphatase binding | IEP | Enrichment |
| MF | GO:0019903 | protein phosphatase binding | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031399 | regulation of protein modification process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Enrichment |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Enrichment |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043543 | protein acylation | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Enrichment |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| MF | GO:2001070 | starch binding | IEP | Enrichment |
| No external refs found! |