Transcript_contig_54389 (54389)


Aliases : 54389

Description : Glycerophosphodiester phosphodiesterase domain [Interproscan].


Gene families : OG_01_0003001 (OrthoFinder) Phylogenetic Tree(s): OG0003001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54389
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000014.1_cds_PRW39100.1_2477 PRW39100 Gde1p 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 75 394
No external refs found!