Transcript_contig_54316 (54316)


Aliases : 54316

Description : Endonuclease/exonuclease/phosphatase [Interproscan].


Gene families : OG_01_0000464 (OrthoFinder) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54316
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cre11.g475900 30775802 RNA processing.RNA decay.deadenylation-dependent... 0.01 OrthoFinder
Cz10g09060.t1 No alias Endonuclease/exonuclease/phosphatase [Interproscan]. 0.02 OrthoFinder
EOD06154 No alias Endonuclease/exonuclease/phosphatase [Interproscan]. 0.01 OrthoFinder
OT_10G01010.1 No alias Endonuclease/exonuclease/phosphatase [Interproscan]. 0.03 OrthoFinder
XM_003057710.1 MicpuC2_32992, 32992 Endonuclease/exonuclease/phosphatase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002213.1_cds_GFH23195.1_17672 HaLaN_20775, GFH23195 Endonuclease/exonuclease/phosphatase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 218 568
No external refs found!