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  5. Cpa|evm.model.tig00000692.77

Cpa|evm.model.tig00000692.77 (tig00000692_g3274.t2)


Aliases : tig00000692_g3274.t2

Description : Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Brassica napus


Gene families : OG_01_0000429 (OrthoFinder) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000692.77
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre12.g534350 30791852 Peroxisomal fatty acid beta-oxidation multifunctional... 0.02 OrthoFinder
Cre16.g695050 30777673 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder
Cz16g07120.t1 No alias 3-hydroxyacyl-CoA dehydrogenase, C-terminal [Interproscan]. 0.02 OrthoFinder
Cz16g07130.t1 No alias 3-hydroxyacyl-CoA dehydrogenase, NAD binding;... 0.02 OrthoFinder
Cz16g07140.t1 No alias Enoyl-CoA hydratase/isomerase [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1334.4 1334.4 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_54790 54790 Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA... 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56488.1_9586 PRW56488 Glyoxysomal fatty acid beta-oxidation multifunctional MFP-a 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEA Interproscan
BP GO:0006631 fatty acid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
CC GO:0000313 organellar ribosome IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR006176 3-OHacyl-CoA_DH_NAD-bd 172 320
IPR006108 3HC_DH_C 339 431
IPR020616 Thiolase_N 528 769
IPR001753 Enoyl-CoA_hydra/iso 2 101
No external refs found!