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  5. Transcript_contig_54177

Transcript_contig_54177 (54177)


Aliases : 54177

Description : Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan].


Gene families : OG_01_0000610 (OrthoFinder) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54177
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cre07.g319300 30774224, GWD1 Carbohydrate metabolism.starch... 0.02 OrthoFinder
Cre07.g332300 30775381, GWD2 Enzyme classification.EC_2 transferases.EC_2.7... 0.01 OrthoFinder
Cre07.g333252 30775340 Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz09g00250.t1 No alias Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000054.1_cds_GFH06757.1_1234 HaLaN_01442, GFH06757 PPDK_N domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000054.1_cds_GFH06759.1_1236 HaLaN_01444, GFH06759 R1 protein, alpha-glucan water dikinase 0.01 OrthoFinder
lcl|BLLF01000851.1_cds_GFH15444.1_9921 HaLaN_11673, GFH15444 PPDK_N domain-containing protein 0.03 OrthoFinder
lcl|BLLF01000851.1_cds_GFH15447.1_9924 HaLaN_11676, GFH15447 PPDK_N domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492664.1_9357 KAA8492664 Alpha-glucan water dikinase, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016301 kinase activity IEA Interproscan
BP GO:0016310 phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002192 PPDK_AMP/ATP-bd 1345 1549
No external refs found!