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  5. Transcript_contig_54103

Transcript_contig_54103 (54103)


Aliases : 54103

Description : DnaJ domain; Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain [Interproscan].


Gene families : OG_01_0002562 (OrthoFinder) Phylogenetic Tree(s): OG0002562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54103
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.11 tig00000241_g20869.t1 DnaJ protein homolog 2 OS=Allium porrum 0.01 OrthoFinder
Cre17.g701500 30782290, DNJ1 DnaJ protein homolog ANJ1 OS=Atriplex nummularia 0.05 OrthoFinder
Cz03g20150.t1 No alias Chaperone DnaJ, C-terminal; Heat shock protein DnaJ,... 0.02 OrthoFinder
Dusal.1250s00001.1 33202354 Chaperone DnaJ, C-terminal [Interproscan]. 0.02 OrthoFinder
PTI_14G02920.1 No alias Chaperone DnaJ, C-terminal; Heat shock protein DnaJ,... 0.01 OrthoFinder
Sro749_g196750.1 Contig2460.g20132 DnaJ protein homolog 1 (Fragment) 0.03 OrthoFinder
TP06G00820.1 No alias DnaJ domain; Chaperone DnaJ, C-terminal [Interproscan]. 0.03 OrthoFinder
XM_002507922.1 MICPUN_97775, 97775 DnaJ domain; Heat shock protein DnaJ, cysteine-rich... 0.02 OrthoFinder
XM_003058537.1 MicpuC2_47362, 47362 Heat shock protein DnaJ, cysteine-rich domain; Chaperone... 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58342.1_7641 PRW58342 DnaJ-like protein 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493592.1_4354 KAA8493592 Chaperone protein dnaJ 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001305 HSP_DnaJ_Cys-rich_dom 168 234
IPR002939 DnaJ_C 142 362
IPR001623 DnaJ_domain 39 96
No external refs found!