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  5. Transcript_contig_53942

Transcript_contig_53942 (53942)


Aliases : 53942

Description : Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan].


Gene families : OG_01_0000480 (OrthoFinder) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_53942
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cre07.g338150 30774299 Protein MEI2-like 2 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Dusal.0138s00015.1 33197022 Mei2/Mei2-like, C-terminal RNA recognition motif; RNA... 0.02 OrthoFinder
OT_05G01690.1 No alias Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.01 OrthoFinder
PTI_05G01370.1 No alias Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 326 423
No external refs found!