Heatmap: Cluster_111 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_11236 (11236)	-0.28	-2.0	0.74	0.77	0.8	-0.4	1.41	-1.75	-	-0.38	-1.64
Transcript_contig_15535 (15535)	0.27	-3.65	0.08	0.84	-1.11	-0.81	1.96	-	-	0.6	-1.2
Transcript_contig_18995 (18995)	1.03	-2.8	0.42	0.26	0.26	-0.18	1.8	-	-	-1.79	-1.25
Transcript_contig_3151 (3151)	0.46	-0.79	0.38	0.74	-0.4	0.72	1.45	-3.0	-5.16	-1.38	-1.33
Transcript_contig_3444 (3444)	0.41	0.73	-0.13	-0.03	-0.22	-0.62	0.79	-0.71	-0.89	-0.08	-0.34
Transcript_contig_4188 (4188)	0.22	-0.82	-2.04	-0.41	-0.89	0.86	2.5	-4.73	-	-2.42	-5.04
Transcript_contig_4887 (4887)	0.32	0.57	-1.46	0.03	-0.36	0.35	1.11	0.14	-3.02	-0.42	-0.49
Transcript_contig_53887 (53887)	0.64	0.49	-1.75	-0.2	-0.01	-0.46	0.99	0.67	-1.06	-0.56	-1.28
Transcript_contig_53942 (53942)	0.62	0.91	-0.49	0.29	0.01	-1.04	0.62	0.94	-6.77	-0.95	-2.54
Transcript_contig_54501 (54501)	0.4	-0.21	0.73	0.52	-0.44	-0.36	1.36	-0.3	-2.84	-1.31	-1.82
Transcript_contig_54831 (54831)	-0.31	-0.74	-1.4	-0.31	0.25	0.39	0.85	-0.29	0.91	-0.36	-0.66
Transcript_contig_54951 (54951)	-0.7	-	1.31	-0.19	-0.07	0.64	1.51	-	-2.31	-0.11	-0.86
Transcript_contig_55459 (55459)	0.73	0.31	0.05	0.55	-0.28	-0.23	1.13	-0.54	-5.7	-0.77	-1.16
Transcript_contig_55557 (55557)	0.38	-0.39	-0.43	0.1	-0.19	-0.1	1.13	-1.03	-0.86	0.3	-0.23
Transcript_contig_56850 (56850)	0.55	-0.44	0.02	0.41	0.02	-0.4	1.42	-1.11	-1.31	-0.38	-1.35
Transcript_contig_56906 (56906)	0.21	-1.02	0.28	0.19	-0.0	0.25	1.74	-1.49	-2.77	-0.88	-1.26
Transcript_contig_57132 (57132)	0.68	0.18	-1.22	-0.02	0.3	0.05	0.89	-0.62	-1.38	0.01	-0.54
Transcript_contig_57755 (57755)	0.17	-1.25	0.74	1.35	-0.01	-0.24	1.35	-2.41	-2.13	-2.2	-2.18
Transcript_contig_57980 (57980)	0.6	-4.53	0.64	1.28	0.56	-0.55	1.56	-4.7	-3.27	-3.83	-2.81
Transcript_contig_58832 (58832)	0.45	-0.03	0.44	0.51	-0.38	-0.17	1.19	0.31	-5.37	-1.49	-1.64
Transcript_contig_59199 (59199)	0.5	0.36	-0.3	-0.47	-0.81	0.36	1.36	-0.19	-0.8	-0.84	-1.54
Transcript_contig_59369 (59369)	0.65	-0.14	-1.31	-0.64	-1.13	0.63	1.95	-0.41	-4.6	-1.15	-1.52
Transcript_contig_60209 (60209)	0.1	-1.7	0.84	0.15	-0.29	0.26	1.71	-0.5	-4.27	-1.35	-1.82
Transcript_contig_60272 (60272)	0.33	-0.9	0.53	-0.06	-1.37	0.4	1.74	-0.18	-5.5	-1.03	-1.48
Transcript_contig_60429 (60429)	-0.48	-5.93	1.21	0.32	0.05	-0.07	2.03	-3.19	-	-1.4	-2.62
Transcript_contig_606 (606)	0.14	-0.14	-0.5	-0.03	-0.38	0.55	1.13	-0.5	-2.72	0.09	-0.05
Transcript_contig_61025 (61025)	0.42	0.24	0.12	0.66	0.41	-0.73	1.55	-0.13	-	-5.3	-5.34
Transcript_contig_61339 (61339)	-0.36	-1.3	0.25	0.23	0.77	-0.12	1.17	-0.68	-0.83	-0.35	-0.7
Transcript_contig_61957 (61957)	0.57	0.5	-0.87	0.25	0.1	-1.06	0.84	0.36	-3.38	0.14	-0.88
Transcript_contig_66202 (66202)	0.72	0.31	0.27	0.11	-0.61	-0.52	0.97	0.4	-1.52	-1.07	-1.42
Transcript_contig_67609 (67609)	-0.12	-0.99	0.93	0.23	0.19	0.26	1.64	-0.94	-	-3.28	-1.26
Transcript_contig_69283 (69283)	0.4	-3.49	-0.47	0.93	0.27	0.75	1.35	-3.61	-1.86	-0.78	-0.79
Transcript_contig_71371 (71371)	0.19	-	0.83	0.81	-2.75	0.53	1.96	-	-	-1.32	-1.2
Transcript_contig_72549 (72549)	0.02	-0.79	0.35	-0.06	0.35	0.73	0.69	-1.22	-1.47	0.19	-0.52
Transcript_contig_78119 (78119)	0.58	-0.32	-5.87	-3.91	-4.4	1.28	1.93	-1.67	-3.35	0.49	-0.95
Transcript_contig_78123 (78123)	0.14	-0.59	-0.07	0.08	0.2	0.19	1.58	-0.72	-1.72	-0.75	-1.13
Transcript_contig_78216 (78216)	-0.14	-0.94	-0.31	-0.1	0.43	0.16	1.67	-0.72	-	-0.23	-0.43
Transcript_contig_78369 (78369)	0.48	-0.0	-0.98	0.08	-0.07	0.28	1.06	-2.29	-1.37	0.52	-0.37
Transcript_contig_78463 (78463)	0.37	0.66	-1.18	-0.23	0.05	-0.29	1.23	-0.06	-2.01	-0.03	-1.16
Transcript_contig_78643 (78643)	0.41	-1.89	-0.74	-0.56	-0.43	0.53	1.96	-2.03	-1.58	-0.46	-0.43
Transcript_contig_78701 (78701)	-0.04	-0.91	0.44	0.37	0.27	0.24	1.45	-0.83	-2.91	-1.14	-0.77
Transcript_contig_78702 (78702)	-0.31	-1.66	0.27	0.45	0.24	0.82	1.37	-1.08	-0.69	-1.26	-1.94
Transcript_contig_79115 (79115)	0.31	-0.23	0.09	-0.18	-0.93	-0.05	1.28	0.02	0.03	-0.71	-1.35
Transcript_contig_79266 (79266)	-0.14	-1.78	-0.18	0.73	0.7	0.35	1.53	-1.76	-2.5	-0.84	-1.19
Transcript_contig_79339 (79339)	0.19	-0.63	0.47	-0.61	-2.83	0.26	1.67	-0.37	-0.41	-0.8	-0.85
Transcript_contig_79867 (79867)	0.48	-0.11	0.45	0.84	0.32	-0.62	1.5	-0.38	-	-5.63	-5.77
Transcript_contig_80055 (80055)	-0.53	-3.0	0.53	0.88	0.79	0.41	1.6	-3.62	-3.88	-1.57	-1.68
Transcript_contig_80375 (80375)	-0.91	-	0.62	0.52	0.17	-0.01	1.94	-	-	-0.35	-0.41
Transcript_contig_80384 (80384)	0.8	0.72	0.24	0.29	-0.84	-0.1	1.08	-0.93	-	-0.55	-1.35
Transcript_contig_80573 (80573)	1.04	-2.89	-3.54	-3.83	-2.98	1.32	2.37	-3.11	-6.27	-1.37	-1.52
Transcript_contig_85905 (85905)	-0.58	-1.62	-1.76	-0.15	-2.04	1.03	2.31	-2.92	-1.9	-1.82	-0.21
Transcript_contig_89150 (89150)	0.2	-0.72	-0.15	0.36	-0.6	-0.0	1.0	-0.36	-0.58	0.2	-0.32
Transcript_contig_89403 (89403)	0.3	-0.04	-0.95	-0.23	-0.16	0.13	1.18	-0.52	-0.87	0.26	-0.47
Transcript_contig_89561 (89561)	-0.38	-2.33	0.04	0.44	-0.18	0.68	1.12	-2.5	0.99	-1.14	-1.42
Transcript_contig_90462 (90462)	0.65	0.24	-1.41	-0.05	-0.27	0.21	1.68	0.38	-4.35	-2.43	-2.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.