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Aliases : tig00000655_g2857.t1
Description : Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana
Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000655.31 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_01G09400.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.01 | OrthoFinder | |
| PTI_12G02970.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... | 0.01 | OrthoFinder | |
| Sro293_g109820.1 | Contig3203.g25303 | ATPase family AAA domain-containing protein 1 | 0.02 | OrthoFinder | |
| TP01G10410.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.01 | OrthoFinder | |
| Transcript_contig_56032 | 56032 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.01 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499688.1_8641 | KAA8499688 | ATPase family AAA domain-containing protein 1-A | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006887 | exocytosis | IEP | Enrichment |
| BP | GO:0008616 | queuosine biosynthetic process | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015297 | antiporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030151 | molybdenum ion binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0031072 | heat shock protein binding | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032940 | secretion by cell | IEP | Enrichment |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0046116 | queuosine metabolic process | IEP | Enrichment |
| BP | GO:0046903 | secretion | IEP | Enrichment |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0140352 | export from cell | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003959 | ATPase_AAA_core | 685 | 807 |
| No external refs found! |