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  5. Transcript_contig_1825

Transcript_contig_1825 (1825)


Aliases : 1825

Description : SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0003332 (OrthoFinder) Phylogenetic Tree(s): OG0003332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_1825
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.69 tig00000711_g3431.t1 DNA repair protein RAD5B OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre03.g210625 30787475 DNA repair protein RAD5A OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD31805 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.01 OrthoFinder
Sro588_g171530.1 Contig4679.g34795 Uncharacterized ATP-dependent helicase C17A2.12 0.01 OrthoFinder
XM_002503018.1 MICPUN_59710, 59710 SNF2 super family 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 518 842
No external refs found!