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  5. Cpa|evm.model.tig00000654.30

Cpa|evm.model.tig00000654.30 (tig00000654_g2824.t1)


Aliases : tig00000654_g2824.t1

Description : ABC transporter B family member 25 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000654.30
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Sro316_g115550.1 Contig2414.g19761 Leptomycin B resistance protein pmd1 0.01 OrthoFinder
XM_002505486.1 MICPUN_87744, 87744 ATP-binding cassette superfamily 0.01 OrthoFinder
XM_003060294.1 MicpuC2_27897, 27897 ATP-binding cassette superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 43 313
IPR003439 ABC_transporter-like_ATP-bd 385 521
No external refs found!