1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000640.11

Cpa|evm.model.tig00000640.11 (tig00000640_g2766.t1)


Aliases : tig00000640_g2766.t1

Description : Probable histidine kinase 4 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000640.11
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.06 OrthoFinder
Cpa|evm.model.tig00000403.48 tig00000403_g305.t1 Ethylene response sensor 1 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cpa|evm.model.tig00020610.13 tig00020610_g11951.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre02.g074150 30785488, COP5 Histidine kinase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g678900 30778058 No description available 0.05 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.04 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.02 OrthoFinder
PTI_22G00210.1 No alias PAS fold-4; Signal transduction histidine kinase,... 0.02 OrthoFinder
SymbC1.scaffold39.189 39.189 FecR protein; Signal transduction histidine kinase,... 0.01 OrthoFinder
XM_003062955.1 MicpuC2_9052, 9052 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
lcl|BLLF01000478.1_cds_GFH12211.1_6688 HaLaN_07851, GFH12211 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12982.1_7459 HaLaN_08776, GFH12982 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01000625.1_cds_GFH13551.1_8028 HaLaN_09455, GFH13551 Signal transduction histidine kinase,... 0.04 OrthoFinder
lcl|BLLF01001425.1_cds_GFH19214.1_13691 HaLaN_16126, GFH19214 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01004756.1_cds_GFH30189.1_24666 HaLaN_28989, GFH30189 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58431.1_8010 PRW58431 LOV domain-containing 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 571 634
IPR001789 Sig_transdc_resp-reg_receiver 944 1046
IPR001789 Sig_transdc_resp-reg_receiver 1109 1228
IPR003594 HATPase_C 690 749
No external refs found!