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  5. Cpa|evm.model.tig00000615.4

Cpa|evm.model.tig00000615.4 (tig00000615_g2530.t1)


Aliases : tig00000615_g2530.t1

Description : Probable histidine kinase 1 OS=Oryza sativa subsp. indica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.4
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000145.25 tig00000145_g8821.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00000480.52 tig00000480_g1320.t1 Histidine kinase 4 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00001178.2 tig00000788_g4091.t1 Ethylene response sensor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020554.106 tig00020554_g10883.t2 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020660.25 tig00021501_g21945.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.05 OrthoFinder
Cpa|evm.model.tig00021517.20 tig00021517_g22008.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cre11.g467678 30775629, COP6 Histidine kinase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre17.g733150 30781867 Histidine kinase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0121s00015.1 33195087 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.01 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
XM_003062955.1 MicpuC2_9052, 9052 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
InterPro domains Description Start Stop
IPR003018 GAF 480 666
IPR001789 Sig_transdc_resp-reg_receiver 1204 1313
IPR003661 HisK_dim/P 842 878
No external refs found!