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  5. lcl|LHPG02000028.1_cds_PRW05844.1_6023

lcl|LHPG02000028.1_cds_PRW05844.1_6023 (PRW05844)


Aliases : PRW05844

Description : 60S ribosomal L27-3-like


Gene families : OG_01_0004223 (OrthoFinder) Phylogenetic Tree(s): OG0004223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000028.1_cds_PRW05844.1_6023
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021275.23 tig00021275_g19883.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cre17.g701650 30782062, RPL27 Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Cz04g09100.t1 No alias Ribosomal protein L27e [Interproscan]. 0.12 OrthoFinder
Dusal.2138s00001.1 33185794 Ribosomal protein L27e; KOW [Interproscan]. 0.08 OrthoFinder
EOD36904 No alias Ribosomal protein L27e [Interproscan]. 0.11 OrthoFinder
OT_05G00120.1 No alias KOW; Ribosomal protein L27e [Interproscan]. 0.14 OrthoFinder
PTI_01G09850.1 No alias Ribosomal protein L27e; KOW [Interproscan]. 0.2 OrthoFinder
Sro245_g097440.1 Contig3087.g24615 60S ribosomal protein L27 0.19 OrthoFinder
SymbC1.scaffold7526.4 7526.4 Ribosomal protein L27e [Interproscan]. 0.03 OrthoFinder
TP15G01980.1 No alias Ribosomal protein L27e [Interproscan]. 0.18 OrthoFinder
Vocar.0004s0217.1 32889937 Ribosomal protein L27e; KOW [Interproscan]. 0.06 OrthoFinder
XM_002504400.1 MICPUN_107054, 107054 Ribosomal protein L27e [Interproscan]. 0.18 OrthoFinder
XM_003059887.1 MicpuC2_34421, 34421 Ribosomal protein L27e [Interproscan]. 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495086.1_3616 KAA8495086 60S ribosomal protein L27-B 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005824 KOW 7 32
IPR001141 Ribosomal_L27e 52 135
No external refs found!