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  5. lcl|LHPG02000028.1_cds_PRW05819.1_6025

lcl|LHPG02000028.1_cds_PRW05819.1_6025 (PRW05819)


Aliases : PRW05819

Description : 60S ribosomal L31


Gene families : OG_01_0003819 (OrthoFinder) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000028.1_cds_PRW05819.1_6025
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.20 tig00020703_g13122.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 OrthoFinder
Cre12.g489153 30793408 Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 OrthoFinder
Cz10g20060.t1 No alias Ribosomal protein L31e [Interproscan]. 0.19 OrthoFinder
Dusal.0029s00041.1 33203765 Ribosomal protein L31e [Interproscan]. 0.05 OrthoFinder
EOD14536 No alias Ribosomal protein L31e [Interproscan]. 0.14 OrthoFinder
EOD38942 No alias Ribosomal protein L31e [Interproscan]. 0.14 OrthoFinder
OT_10G01980.1 No alias Ribosomal protein L31e [Interproscan]. 0.15 OrthoFinder
PTI_07G02120.1 No alias Ribosomal protein L31e [Interproscan]. 0.12 OrthoFinder
Sro1684_g291000.1 Contig2811.g22545 60S ribosomal protein L31 0.26 OrthoFinder
TP02G04920.1 No alias Ribosomal protein L31e [Interproscan]. 0.28 OrthoFinder
Vocar.0016s0109.1 32897984 Ribosomal protein L31e [Interproscan]. 0.12 OrthoFinder
XM_003055597.1 MicpuC2_24390, 24390 Ribosomal protein L31e [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01004002.1_cds_GFH28711.1_23188 HaLaN_27249, GFH28711 Ribosomal protein L31e [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493621.1_4383 KAA8493621 60S ribosomal protein L31 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 9 88
No external refs found!