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Aliases : PRW05889
Description : Short-chain dehydrogenase isoform B
Gene families : OG_01_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000027.1_cds_PRW05889.1_5930 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020941.47 | tig00020941_g16239.t1 | No description available | 0.02 | OrthoFinder | |
| Transcript_contig_55122 | 55122 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_58496 | 58496 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000009 | alpha-1,6-mannosyltransferase activity | IEP | Enrichment |
| MF | GO:0000030 | mannosyltransferase activity | IEP | Enrichment |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
| MF | GO:0004100 | chitin synthase activity | IEP | Enrichment |
| MF | GO:0004376 | glycolipid mannosyltransferase activity | IEP | Enrichment |
| MF | GO:0004514 | nicotinate-nucleotide diphosphorylase (carboxylating) activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0006023 | aminoglycan biosynthetic process | IEP | Enrichment |
| BP | GO:0006030 | chitin metabolic process | IEP | Enrichment |
| BP | GO:0006031 | chitin biosynthetic process | IEP | Enrichment |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Enrichment |
| MF | GO:0016161 | beta-amylase activity | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0030151 | molybdenum ion binding | IEP | Enrichment |
| BP | GO:0046349 | amino sugar biosynthetic process | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:1901073 | glucosamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002347 | SDR_fam | 11 | 214 |
| No external refs found! |