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  5. lcl|LHPG02000026.1_cds_PRW18307.1_5882

lcl|LHPG02000026.1_cds_PRW18307.1_5882 (PRW18307)


Aliases : PRW18307

Description : Propionyl-carboxylase alpha mitochondrial


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000026.1_cds_PRW18307.1_5882
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000133.42 tig00000133_g7706.t1 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.01 OrthoFinder
Cpa|evm.model.tig00000133.43 tig00000133_g7706.t1 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.01 OrthoFinder
Cre06.g278098 30778609, MCC1 Amino acid metabolism.degradation.branched-chain amino... 0.04 OrthoFinder
PTI_23G01920.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.02 OrthoFinder
PTI_26G00480.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.02 OrthoFinder
Sro434_g142010.1 Contig783.g8758 Propionyl-CoA carboxylase, biotin carboxylase and... 0.02 OrthoFinder
Transcript_contig_55755 55755 Biotin carboxylase, C-terminal; Propionyl-coenzyme A... 0.04 OrthoFinder
Transcript_contig_89882 89882 Biotin carboxylase, C-terminal; Biotin carboxylase-like,... 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497406.1_1135 KAA8497406 Propionyl-CoA carboxylase alpha chain, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 372 478
IPR005481 BC-like_N 37 142
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 150 357
IPR000089 Biotin_lipoyl 640 706
IPR041265 PCC_BT 558 630
No external refs found!