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  5. lcl|LHPG02000024.1_cds_PRW20358.1_5516

lcl|LHPG02000024.1_cds_PRW20358.1_5516 (PRW20358)


Aliases : PRW20358

Description : GTP diphosphokinase chloroplastic isoform X1 isoform A


Gene families : OG_01_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000024.1_cds_PRW20358.1_5516
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cz04g33070.t1 No alias RelA/SpoT; HD domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold4.320 4.320 (Uracil-5)-methyltransferase family; Adenylate kinase,... 0.02 OrthoFinder
SymbC1.scaffold7.6 7.6 OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
Transcript_contig_55304 55304 HD domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_89148 89148 HD domain; RelA/SpoT [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0238.1 32892633 HD domain; RelA/SpoT [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34085.1_2875 PRW34085 Putative GTP diphosphokinase chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 485 603
IPR007685 RelA_SpoT 1294 1437
IPR004095 TGS 1624 1682
No external refs found!