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  5. lcl|LHPG02000023.1_cds_PRW20535.1_5471

lcl|LHPG02000023.1_cds_PRW20535.1_5471 (PRW20535)


Aliases : PRW20535

Description : 3-Isopropylmalate dehydrogenase isoform B


Gene families : OG_01_0002074 (OrthoFinder) Phylogenetic Tree(s): OG0002074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000023.1_cds_PRW20535.1_5471
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Dusal.0239s00002.1 33192052 Isopropylmalate dehydrogenase-like domain [Interproscan]. 0.02 OrthoFinder
Sro143_g066770.1 Contig3754.g28783 3-isopropylmalate dehydrogenase 0.01 OrthoFinder
Vocar.0003s0177.1 32888941 Isopropylmalate dehydrogenase-like domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR024084 IsoPropMal-DH-like_dom 32 376
IPR006342 FkbM_mtfrase 734 870
No external refs found!