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  5. lcl|LHPG02000023.1_cds_PRW20477.1_5359

lcl|LHPG02000023.1_cds_PRW20477.1_5359 (PRW20477)


Aliases : PRW20477

Description : DNA polymerase epsilon catalytic subunit A


Gene families : OG_01_0002052 (OrthoFinder) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000023.1_cds_PRW20477.1_5359
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
OT_11G01900.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.02 OrthoFinder
Transcript_contig_613 613 DNA-directed DNA polymerase, family B, exonuclease... 0.02 OrthoFinder
XM_003061673.1 MicpuC2_51203, 51203 DNA-directed DNA polymerase, family B, multifunctional... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
CC GO:0005740 mitochondrial envelope IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031967 organelle envelope IEP Enrichment
CC GO:0031975 envelope IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 651 1119
IPR006133 DNA-dir_DNA_pol_B_exonuc 122 454
IPR013697 DNA_pol_e_suA_C 1571 1938
No external refs found!