lcl|LHPG02000021.1_cds_PRW20803.1_5002 (PRW20803)

Aliases : PRW20803

Description : 60S ribosomal L35-like

Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000021.1_cds_PRW20803.1_5002
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000241.79	tig00000241_g20941.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder
Cre14.g617900	30776584, RPL35	Protein biosynthesis.cytosolic ribosome.large subunit...	0.22	OrthoFinder
Cz12g12300.t1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.14	OrthoFinder
Dusal.0936s00001.1	33189602	Ribosomal protein L29/L35 [Interproscan].	0.03	OrthoFinder
EOD14796	No alias	Ribosomal protein L29/L35 [Interproscan].	0.13	OrthoFinder
OT_05G01490.1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.07	OrthoFinder
PTI_06G01310.1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.17	OrthoFinder
Sro1394_g268940.1	Contig598.g7460	60S ribosomal protein L35	0.2	OrthoFinder
SymbC1.scaffold356.4	356.4	Ribosomal protein L29/L35 [Interproscan].	0.04	OrthoFinder
TP12G02050.1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.22	OrthoFinder
Vocar.0001s1458.1	32885943	Ribosomal protein L29/L35 [Interproscan].	0.06	OrthoFinder
XM_002507650.1	MICPUN_107597, 107597	Ribosomal protein L29/L35 [Interproscan].	0.17	OrthoFinder
XM_003056132.1	MicpuC2_49485, 49485	60S ribosomal protein L35 (RPL35)	0.14	OrthoFinder
lcl\|VRMN01000009.1_cds_KAA8492667.1_9360	KAA8492667	60S ribosomal protein L35	0.09	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Enrichment
MF	GO:0004402	histone acetyltransferase activity	IEP	Enrichment
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0005996	monosaccharide metabolic process	IEP	Enrichment
BP	GO:0006006	glucose metabolic process	IEP	Enrichment
BP	GO:0006007	glucose catabolic process	IEP	Enrichment
BP	GO:0006658	phosphatidylserine metabolic process	IEP	Enrichment
BP	GO:0006659	phosphatidylserine biosynthetic process	IEP	Enrichment
BP	GO:0006788	heme oxidation	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006817	phosphate ion transport	IEP	Enrichment
BP	GO:0006820	anion transport	IEP	Enrichment
BP	GO:0006873	cellular ion homeostasis	IEP	Enrichment
BP	GO:0006875	cellular metal ion homeostasis	IEP	Enrichment
BP	GO:0006879	cellular iron ion homeostasis	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
BP	GO:0009056	catabolic process	IEP	Enrichment
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Enrichment
BP	GO:0015698	inorganic anion transport	IEP	Enrichment
CC	GO:0015934	large ribosomal subunit	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
BP	GO:0016052	carbohydrate catabolic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0019318	hexose metabolic process	IEP	Enrichment
BP	GO:0019320	hexose catabolic process	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0030003	cellular cation homeostasis	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
CC	GO:0030286	dynein complex	IEP	Enrichment
CC	GO:0032993	protein-DNA complex	IEP	Enrichment
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0044282	small molecule catabolic process	IEP	Enrichment
CC	GO:0044391	ribosomal subunit	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
MF	GO:0045735	nutrient reservoir activity	IEP	Enrichment
BP	GO:0046365	monosaccharide catabolic process	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Enrichment
BP	GO:0055072	iron ion homeostasis	IEP	Enrichment
BP	GO:0055082	cellular chemical homeostasis	IEP	Enrichment
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Enrichment
BP	GO:1901575	organic substance catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001854	Ribosomal_L29/L35	8	64

External Links

No external refs found!

lcl|LHPG02000021.1_cds_PRW20803.1_5002 (PRW20803)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation