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  5. lcl|LHPG02000018.1_cds_PRW32961.1_3745

lcl|LHPG02000018.1_cds_PRW32961.1_3745 (PRW32961)


Aliases : PRW32961

Description : Calmodulin


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000018.1_cds_PRW32961.1_3745
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021435.44 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cpa|evm.model.tig00021435.47 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cre03.g150300 30787530 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cz16g19120.t1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Sro1012_g231150.1 Contig304.g3985 Calmodulin-5/6/7/8 0.01 OrthoFinder
Sro2020_g311360.1 Contig280.g3625 Myosin light chain 1/3, skeletal muscle isoform 0.03 OrthoFinder
Sro426_g140290.1 Contig1720.g15374 Putative calmodulin-like protein 0.02 OrthoFinder
SymbC1.scaffold8915.4 8915.4 EF-hand domain; EF-hand domain pair [Interproscan]. 0.02 OrthoFinder
TP07G01950.1 No alias EF-hand domain [Interproscan]. 0.04 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.04 OrthoFinder
Vocar.0019s0206.1 32892735 EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_003055480.1 MicpuC2_11510, 11510 EF-hand domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Enrichment
BP GO:0009298 GDP-mannose biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019673 GDP-mannose metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 49 110
No external refs found!