1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000018.1_cds_PRW32940.1_3703

lcl|LHPG02000018.1_cds_PRW32940.1_3703 (PRW32940)


Aliases : PRW32940

Description : Ribosomal RNA large subunit methyltransferase I


Gene families : OG_01_0001960 (OrthoFinder) Phylogenetic Tree(s): OG0001960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000018.1_cds_PRW32940.1_3703
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Sro1121_g243420.1 Contig138.g1535 Large subunit methyltransferase I 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR019614 SAM-dep_methyl-trfase 305 481
IPR001680 WD40_repeat 669 702
IPR001680 WD40_repeat 617 652
IPR041532 RlmI_PUA-like 77 141
No external refs found!