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  5. lcl|LHPG02000018.1_cds_PRW32925.1_3699

lcl|LHPG02000018.1_cds_PRW32925.1_3699 (PRW32925)


Aliases : PRW32925

Description : Farnesyltransferase geranylgeranyltransferase type-1 subunit alpha


Gene families : OG_01_0003652 (OrthoFinder) Phylogenetic Tree(s): OG0003652_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000018.1_cds_PRW32925.1_3699
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre01.g016950 30788753 Protein modification.lipidation.Cys-linked... 0.02 OrthoFinder
PTI_08G02090.1 No alias Protein prenyltransferase, alpha subunit [Interproscan]. 0.02 OrthoFinder
Sro93_g048740.1 Contig3841.g29562 Geranylgeranyltransferase type-1 subunit alpha 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008318 protein prenyltransferase activity IEA Interproscan
BP GO:0018342 protein prenylation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Enrichment
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0033176 proton-transporting V-type ATPase complex IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001606 ARID_dom 342 422
IPR002088 Prenyl_trans_a 105 130
IPR002088 Prenyl_trans_a 201 227
IPR002088 Prenyl_trans_a 142 167
No external refs found!