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  5. Cpa|evm.model.tig00000572.5

Cpa|evm.model.tig00000572.5 (tig00000572_g2208.t1)


Aliases : tig00000572_g2208.t1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000572.5
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
PTI_07G02520.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
SymbC1.scaffold708.8 708.8 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
TP18G00080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
lcl|BLLF01000498.1_cds_GFH12387.1_6864 HaLaN_08064, GFH12387 ATP-binding cassette, subfamily B(MDR/TAP), member 1 0.02 OrthoFinder
lcl|BLLF01000605.1_cds_GFH13375.1_7852 HaLaN_09249, GFH13375 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
lcl|BLLF01002502.1_cds_GFH24318.1_18795 HaLaN_22091, GFH24318 ATP-binding cassette transporter 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 114 259
IPR011527 ABC1_TM_dom 428 714
IPR003439 ABC_transporter-like_ATP-bd 759 896
No external refs found!