Cpa|evm.model.tig00000572.4 (tig00000572_g2208.t1)

Aliases : tig00000572_g2208.t1

Description : ABC transporter B family member 4 OS=Arabidopsis thaliana

Gene families : OG_01_0007196 (OrthoFinder) Phylogenetic Tree(s): OG0007196_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000572.4
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold3889.1	3889.1	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
lcl\|BLLF01000026.1_cds_GFH06184.1_661	HaLaN_00774, GFH06184	ABC transporter type 1, transmembrane domain [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01000498.1_cds_GFH12389.1_6866	HaLaN_08066, GFH12389	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
lcl\|BLLF01000605.1_cds_GFH13376.1_7853	HaLaN_09250, GFH13376	ABC transporter type 1, transmembrane domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	124	313

External Links

No external refs found!