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  5. Cpa|evm.model.tig00000571.5

Cpa|evm.model.tig00000571.5 (tig00000571_g2156.t1)


Aliases : tig00000571_g2156.t1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor


Gene families : OG_01_0001930 (OrthoFinder) Phylogenetic Tree(s): OG0001930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000571.5
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre06.g260850 30778981, NOP14 Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 OrthoFinder
Cz09g21210.t1 No alias Nucleolar protein 14 [Interproscan]. 0.09 OrthoFinder
Cz09g21220.t1 No alias Nucleolar protein 14 [Interproscan]. 0.04 OrthoFinder
Dusal.0260s00014.1 33185453 Nucleolar protein 14 [Interproscan]. 0.07 OrthoFinder
EOD04709 No alias Nucleolar protein 14 [Interproscan]. 0.09 OrthoFinder
EOD09265 No alias Nucleolar protein 14 [Interproscan]. 0.07 OrthoFinder
OT_10G00090.1 No alias Nucleolar protein 14 [Interproscan]. 0.08 OrthoFinder
PTI_11G02900.1 No alias Nucleolar protein 14 [Interproscan]. 0.13 OrthoFinder
Sro246_g097770.1 Contig171.g1961 Probable nucleolar complex protein 14 0.13 OrthoFinder
TP22G03060.1 No alias Nucleolar protein 14 [Interproscan]. 0.08 OrthoFinder
Transcript_contig_55937 55937 Nucleolar protein 14 [Interproscan]. 0.05 OrthoFinder
Vocar.0002s0458.1 32891017 Nucleolar protein 14 [Interproscan]. 0.06 OrthoFinder
XM_002504303.1 MICPUN_65684, 65684 Nucleolar protein 14 [Interproscan]. 0.05 OrthoFinder
XM_003064807.1 MicpuC2_43701, 43701 Nucleolar protein 14 [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01001290.1_cds_GFH18364.1_12841 HaLaN_15158, GFH18364 Nucleolar protein 14 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001290.1_cds_GFH18365.1_12842 HaLaN_15159, GFH18365 Nucleolar protein 14 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57304.1_9388 PRW57304 Nucleolar 14 0.08 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498696.1_7649 KAA8498696 Nucleolar protein 14 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0032040 small-subunit processome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007276 Nop14 35 350
IPR007276 Nop14 758 879
IPR007276 Nop14 387 757
No external refs found!