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  5. lcl|LHPG02000015.1_cds_PRW33815.1_2939

lcl|LHPG02000015.1_cds_PRW33815.1_2939 (PRW33815)


Aliases : PRW33815

Description : AMP-binding isoform A


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000015.1_cds_PRW33815.1_2939
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
EOD41823 No alias Acyl-CoA synthetase [Ensembl]. 0.01 OrthoFinder
Sro461_g147630.1 Contig3552.g27417 7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl 0.01 OrthoFinder
Transcript_contig_54181 54181 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.03 OrthoFinder
Transcript_contig_56582 56582 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.02 OrthoFinder
Transcript_contig_57347 57347 AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002697.1_cds_GFH25030.1_19507 HaLaN_22922, GFH25030 2-hydroxyacyl-lyase 1 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498817.1_7770 KAA8498817 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004800 thyroxine 5'-deiodinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 535 611
IPR000873 AMP-dep_Synth/Lig 105 526
No external refs found!