lcl|LHPG02000014.1_cds_PRW39291.1_2545 (PRW39291)

Aliases : PRW39291

Description : ABC multidrug resistance associated

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000014.1_cds_PRW39291.1_2545
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020684.9	tig00020684_g12858.t1	Solute transport.primary active transport.ABC...	0.03	OrthoFinder
Cre02.g097800	30785105	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Dusal.0852s00003.1	33185426	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
Sro1659_g289230.1	Contig194.g2265	Oligomycin resistance ATP-dependent permease YOR1	0.01	OrthoFinder
Vocar.0012s0088.1	32894879	ABC transporter-like; ABC transporter type 1,...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000292	For/NO2_transpt	2152	2396
IPR003439	ABC_transporter-like_ATP-bd	1101	1231
IPR003439	ABC_transporter-like_ATP-bd	1744	1893
IPR011527	ABC1_TM_dom	761	1040
IPR011527	ABC1_TM_dom	1397	1633

External Links

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lcl|LHPG02000014.1_cds_PRW39291.1_2545 (PRW39291)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation