lcl|LHPG02000014.1_cds_PRW39258.1_2693 (PRW39258)


Aliases : PRW39258

Description : Potassium channel SKOR-like isoform X1


Gene families : OG_01_0000719 (OrthoFinder) Phylogenetic Tree(s): OG0000719_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000014.1_cds_PRW39258.1_2693
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cre01.g012650 30788583 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Cre01.g012850 30789525 Solute transport.channels.VIC superfamily.voltage-gated... 0.03 OrthoFinder
Dusal.0441s00002.1 33203015 Ion transport domain; Ankyrin repeat; Ankyrin... 0.02 OrthoFinder
Dusal.0944s00004.1 33188586 Ion transport domain [Interproscan]. 0.03 OrthoFinder
PTI_10G02890.1 No alias Ion transport domain; Ankyrin repeat-containing domain;... 0.02 OrthoFinder
lcl|BLLF01001027.1_cds_GFH16633.1_11110 HaLaN_13091, GFH16633 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
BP GO:0051321 meiotic cell cycle IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 752 785
IPR005821 Ion_trans_dom 956 1216
IPR020683 Ankyrin_rpt-contain_dom 1585 1671
IPR020683 Ankyrin_rpt-contain_dom 1685 1772
No external refs found!