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  5. lcl|LHPG02000013.1_cds_PRW44284.1_2122

lcl|LHPG02000013.1_cds_PRW44284.1_2122 (PRW44284)


Aliases : PRW44284

Description : DNA (cytosine-5)-methyltransferase CMT1 isoform A


Gene families : OG_01_0000605 (OrthoFinder) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000013.1_cds_PRW44284.1_2122
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cz14g11270.t1 No alias C-5 cytosine methyltransferase [Interproscan]. 0.04 OrthoFinder
Dusal.0396s00005.1 33198509 C-5 cytosine methyltransferase [Interproscan]. 0.02 OrthoFinder
EOD21882 No alias C-5 cytosine methyltransferase; DNA... 0.02 OrthoFinder
XM_003058634.1 MicpuC2_16926, 16926 C-5 cytosine methyltransferase [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000022.1_cds_GFH06104.1_581 HaLaN_00677, GFH06104 Cytosine-specific methyltransferase 0.02 OrthoFinder
lcl|BLLF01002836.1_cds_GFH25512.1_19989 HaLaN_23491, GFH25512 BTB POZ and MATH domain-containing 2-like isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032048 cardiolipin metabolic process IEP Enrichment
BP GO:0032049 cardiolipin biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0046471 phosphatidylglycerol metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 627 761
IPR001525 C5_MeTfrase 1097 1179
No external refs found!