1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000012.1_cds_PRW45057.1_1639

lcl|LHPG02000012.1_cds_PRW45057.1_1639 (PRW45057)


Aliases : PRW45057

Description : E3 ubiquitin-ligase UPL6


Gene families : OG_01_0000849 (OrthoFinder) Phylogenetic Tree(s): OG0000849_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW45057.1_1639
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.52 tig00000254_g22505.t1 E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre03.g159200 30788289, UBC8 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
OT_13G02670.1 No alias HECT domain [Interproscan]. 0.02 OrthoFinder
PTI_13G01260.1 No alias HECT domain [Interproscan]. 0.04 OrthoFinder
Vocar.0019s0252.1 32892739 HECT domain [Interproscan]. 0.02 OrthoFinder
XM_002503167.1 MICPUN_108435, 108435 Ubiquitin protein ligase, gene model incomplete 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
BP GO:0019310 inositol catabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046677 response to antibiotic IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0050113 inositol oxygenase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000569 HECT_dom 637 942
No external refs found!