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  5. lcl|LHPG02000012.1_cds_PRW44986.1_1932

lcl|LHPG02000012.1_cds_PRW44986.1_1932 (PRW44986)


Aliases : PRW44986

Description : MATE efflux family


Gene families : OG_01_0000080 (OrthoFinder) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW44986.1_1932
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre10.g445850 30790079 Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder
Cz03g01120.t1 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
Dusal.2268s00001.1 33203467 Multi antimicrobial extrusion protein [Interproscan]. 0.03 OrthoFinder
Sro36_g022690.2 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 6 165
No external refs found!