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  5. lcl|LHPG02000012.1_cds_PRW44840.1_1820

lcl|LHPG02000012.1_cds_PRW44840.1_1820 (PRW44840)


Aliases : PRW44840

Description : Nitrate reductase


Gene families : OG_01_0000249 (OrthoFinder) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW44840.1_1820
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001177.10 tig00001177_g7365.t1 Nutrient uptake.nitrogen assimilation.nitrate... 0.01 OrthoFinder
Cre09.g410950 30780737, NIT1 Nutrient uptake.nitrogen assimilation.nitrate... 0.02 OrthoFinder
Cz14g14210.t1 No alias Flavoprotein pyridine nucleotide cytochrome... 0.03 OrthoFinder
Dusal.0498s00006.1 33193569 Flavoprotein pyridine nucleotide cytochrome... 0.01 OrthoFinder
PTI_20G01660.1 No alias Flavoprotein pyridine nucleotide cytochrome... 0.02 OrthoFinder
Sro1064_g237250.1 Contig2708.g21805 Nitrate reductase [NAD(P)H] 0.01 OrthoFinder
SymbC1.scaffold233.1 233.1 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_78382 78382 Oxidoreductase, molybdopterin-binding domain; Moybdenum... 0.02 OrthoFinder
Transcript_contig_79406 79406 Oxidoreductase FAD/NAD(P)-binding; Cytochrome b5-like... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498335.1_7288 KAA8498335 Nitrate reductase NADH 2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0030151 molybdenum ion binding IEA Interproscan
BP GO:0051260 protein homooligomerization IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010167 response to nitrate IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0015706 nitrate transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1901698 response to nitrogen compound IEP Enrichment
BP GO:1901700 response to oxygen-containing compound IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005066 MoCF_OxRdtse_dimer 2144 2186
IPR001510 Znf_PARP 1032 1103
IPR001433 OxRdtase_FAD/NAD-bd 2463 2515
IPR008333 Cbr1-like_FAD-bd_dom 2376 2429
IPR003131 T1-type_BTB 811 905
IPR001199 Cyt_B5-like_heme/steroid-bd 2262 2332
IPR000572 OxRdtase_Mopterin-bd_dom 2009 2071
IPR000572 OxRdtase_Mopterin-bd_dom 1951 2000
No external refs found!