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Aliases : PRW51063
Description : UPF0187 chloroplastic
Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000010.1_cds_PRW51063.1_920 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD06418 | No alias | Bestrophin/UPF0187 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD20640 | No alias | Bestrophin/UPF0187 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD38010 | No alias | Bestrophin/UPF0187 [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_78049 | 78049 | Bestrophin/UPF0187 [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000030 | mannosyltransferase activity | IEP | Enrichment |
| CC | GO:0000139 | Golgi membrane | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006536 | glutamate metabolic process | IEP | Enrichment |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Enrichment |
| MF | GO:0015930 | glutamate synthase activity | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Enrichment |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Enrichment |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021134 | Bestrophin/UPF0187 | 125 | 407 |
| No external refs found! |