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Aliases : PRW51058
Description : Ribosomal S1
Gene families : OG_01_0003147 (OrthoFinder) Phylogenetic Tree(s): OG0003147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000010.1_cds_PRW51058.1_1171 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000842.28 | tig00000842_g4847.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | OrthoFinder | |
| Cre16.g660150 | 30777532 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.19 | OrthoFinder | |
| Cz02g17070.t1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.17 | OrthoFinder | |
| Dusal.0043s00003.1 | 33199620 | Ribosomal protein S10 domain [Interproscan]. | 0.11 | OrthoFinder | |
| EOD09635 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.15 | OrthoFinder | |
| OT_03G01040.1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.1 | OrthoFinder | |
| PTI_31G00020.1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.07 | OrthoFinder | |
| Sro143_g066550.1 | Contig3754.g28761 | 40S ribosomal protein S20 | 0.2 | OrthoFinder | |
| SymbC1.scaffold2016.8 | 2016.8 | Ribosomal protein S10 domain [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold3818.4 | 3818.4 | Ribosomal protein S10 domain [Interproscan]. | 0.02 | OrthoFinder | |
| TP04G01100.1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.05 | OrthoFinder | |
| Vocar.0004s0092.1 | 32889737 | Ribosomal protein S10 domain [Interproscan]. | 0.11 | OrthoFinder | |
| XM_002501663.1 | MICPUN_57744, 57744 | Ribosomal protein S10 domain [Interproscan]. | 0.18 | OrthoFinder | |
| XM_003062597.1 | MicpuC2_35904, 35904 | Ribosomal protein S10 domain [Interproscan]. | 0.11 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499872.1_8825 | KAA8499872 | 40S ribosomal protein S20 | 0.11 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Enrichment |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Enrichment |
| MF | GO:0004619 | phosphoglycerate mutase activity | IEP | Enrichment |
| MF | GO:0005047 | signal recognition particle binding | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| CC | GO:0005785 | signal recognition particle receptor complex | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006007 | glucose catabolic process | IEP | Enrichment |
| BP | GO:0006359 | regulation of transcription by RNA polymerase III | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006658 | phosphatidylserine metabolic process | IEP | Enrichment |
| BP | GO:0006659 | phosphatidylserine biosynthetic process | IEP | Enrichment |
| BP | GO:0006788 | heme oxidation | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006817 | phosphate ion transport | IEP | Enrichment |
| BP | GO:0006820 | anion transport | IEP | Enrichment |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Enrichment |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Enrichment |
| BP | GO:0006879 | cellular iron ion homeostasis | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Enrichment |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015698 | inorganic anion transport | IEP | Enrichment |
| MF | GO:0015925 | galactosidase activity | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| BP | GO:0016480 | negative regulation of transcription by RNA polymerase III | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0019320 | hexose catabolic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| CC | GO:0030286 | dynein complex | IEP | Enrichment |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| CC | GO:0034357 | photosynthetic membrane | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| CC | GO:0042651 | thylakoid membrane | IEP | Enrichment |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| MF | GO:0045735 | nutrient reservoir activity | IEP | Enrichment |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0055072 | iron ion homeostasis | IEP | Enrichment |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Enrichment |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| No external refs found! |