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  5. lcl|LHPG02000009.1_cds_PRW56153.1_10106

lcl|LHPG02000009.1_cds_PRW56153.1_10106 (PRW56153)


Aliases : PRW56153

Description : Malonate-ligase


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW56153.1_10106
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030900 30788595 Coenzyme metabolism.phylloquinone... 0.02 OrthoFinder
Dusal.0528s00004.1 33190448 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
EOD19511 No alias Putative long-chain-fatty-acid-CoA ligase [Ensembl]. 0.02 OrthoFinder
Sro65_g036780.1 Contig155.g1748 7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl 0.02 OrthoFinder
SymbC1.scaffold4.172 4.172 Major facilitator superfamily; D-isomer specific... 0.01 OrthoFinder
Transcript_contig_56582 56582 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 54 423
IPR025110 AMP-bd_C 440 477
No external refs found!