lcl|LHPG02000008.1_cds_PRW56731.1_9765 (PRW56731)


Aliases : PRW56731

Description : Zinc finger CONSTANS-LIKE 5


Gene families : OG_01_0000376 (OrthoFinder) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56731.1_9765
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cz04g06060.t1 No alias CCT domain; B-box-type zinc finger [Interproscan]. 0.02 OrthoFinder
Dusal.0007s00046.1 33201165 CCT domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003825.1_cds_GFH28307.1_22784 HaLaN_26781, GFH28307 Putative two-component response regulator-like APRR5-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000315 Znf_B-box 7 52
IPR010402 CCT_domain 247 287
No external refs found!