lcl|LHPG02000008.1_cds_PRW56730.1_9650 (PRW56730)


Aliases : PRW56730

Description : Hypothetical protein


Gene families : OG_01_0000346 (OrthoFinder) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56730.1_9650
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre12.g540500 30792634 Peroxisomal membrane protein 11A OS=Arabidopsis thaliana 0.03 OrthoFinder
Transcript_contig_2895 2895 Hypothetical protein 0.03 OrthoFinder
Transcript_contig_4643 4643 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_54770 54770 Hypothetical protein 0.04 OrthoFinder
Transcript_contig_55189 55189 Hypothetical protein 0.05 OrthoFinder
Transcript_contig_55818 55818 Hypothetical protein 0.03 OrthoFinder
Transcript_contig_55955 55955 Hypothetical protein 0.06 OrthoFinder
Transcript_contig_56168 56168 Hypothetical protein 0.07 OrthoFinder
Transcript_contig_56745 56745 Hypothetical protein 0.05 OrthoFinder
Transcript_contig_59216 59216 Hypothetical protein 0.07 OrthoFinder
Transcript_contig_59611 59611 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_68927 68927 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000612.1_cds_GFH13438.1_7915 HaLaN_09324, GFH13438 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000612.1_cds_GFH13439.1_7916 HaLaN_09325, GFH13439 Peroxisomal biogenesis factor 11 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59469.1_6283 PRW59469 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59841.1_6287 PRW59841 Hypothetical protein 0.04 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50823.1_1028 PRW50823 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004100 chitin synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006023 aminoglycan biosynthetic process IEP Enrichment
BP GO:0006030 chitin metabolic process IEP Enrichment
BP GO:0006031 chitin biosynthetic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0009620 response to fungus IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045132 meiotic chromosome segregation IEP Enrichment
BP GO:0046349 amino sugar biosynthetic process IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0050832 defense response to fungus IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:0098813 nuclear chromosome segregation IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901071 glucosamine-containing compound metabolic process IEP Enrichment
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903046 meiotic cell cycle process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!