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  5. lcl|LHPG02000007.1_cds_PRW57495.1_9098

lcl|LHPG02000007.1_cds_PRW57495.1_9098 (PRW57495)


Aliases : PRW57495

Description : Histone H4


Gene families : OG_01_0000049 (OrthoFinder) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57495.1_9098
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264600 30778471, HFO14 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g265050 30779745, HFO13 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g265200 30779324 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g265450 30780160, HFO12 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g266600 30779351 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g268000 30778752, HFO10 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g268400 30778503, HFO9 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g271300 30778524, HFO8 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g274150 30779076 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g274300 30779970, HFO29 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g274900 30779353 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g275700 30779739, HFO4 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g276650 30778456 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre06.g276800 30779091, HFO24 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre12.g504600 30793030, HFO15 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g504850 30792412, HFO16 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre12.g505450 30792334, HFO17 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g506350 30793405, HFO18 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g506450 30793367, HFO35 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre17.g708650 30782678, HFO20 Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder
Cre17.g709100 30782193 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cz05g04160.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
Cz07g08160.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
Cz08g27150.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Cz13g04220.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
Cz18g11090.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.04 OrthoFinder
Dusal.0002s00031.1 33187978 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0024s00010.1 33202207 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00002.1 33185341 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00025.1 33185347 CENP-T/Histone H4, histone fold [Interproscan]. 0.01 OrthoFinder
Dusal.0152s00017.1 33186206 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0260s00015.1 33185469 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0424s00016.1 33197346 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Dusal.0912s00007.1 33187594 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
EOD13039 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD23019 No alias Putative histone H4 [Ensembl]. 0.01 OrthoFinder
PTI_06G03840.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
PTI_06G03920.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Sro1535_g280560.1 Contig3021.g24093 Histone H4 0.03 OrthoFinder
Sro1642_g288070.1 Contig4503.g33765 Histone H4 0.01 OrthoFinder
Sro2314_g322920.1 Contig3467.g26906 Histone H4 0.03 OrthoFinder
Transcript_contig_54704 54704 Hypothetical protein 0.02 OrthoFinder
Vocar.0002s0360.1 32890737 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0182.1 32894065 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
XM_002502186.1 MICPUN_81444, 81444 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
XM_003059474.1 MicpuC2_17893, 17893 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
XM_003061468.1 MicpuC2_20662, 20662 Histone H4 0.02 OrthoFinder
XM_003061710.1 MicpuC2_51276, 51276 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
XM_003062992.1 MicpuC2_52643, 52643 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 35 96
No external refs found!