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  5. lcl|LHPG02000007.1_cds_PRW57415.1_9061

lcl|LHPG02000007.1_cds_PRW57415.1_9061 (PRW57415)


Aliases : PRW57415

Description : DNA repair UVH3 isoform X2


Gene families : OG_01_0002273 (OrthoFinder) Phylogenetic Tree(s): OG0002273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57415.1_9061
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Vocar.0005s0232.1 32883684 XPG N-terminal; XPG-I domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR006085 XPG_DNA_repair_N 1 96
IPR006086 XPG-I_dom 793 876
No external refs found!