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  5. lcl|LHPG02000007.1_cds_PRW57306.1_8856

lcl|LHPG02000007.1_cds_PRW57306.1_8856 (PRW57306)


Aliases : PRW57306

Description : Succinate dehydrogenase iron-sulfur subunit


Gene families : OG_01_0003731 (OrthoFinder) Phylogenetic Tree(s): OG0003731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57306.1_8856
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264200 30779531, SDH2 Cellular respiration.tricarboxylic acid cycle.succinate... 0.02 OrthoFinder
PTI_21G02050.1 No alias Succinate dehydogenase/fumarate reductase N-terminal;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0004340 glucokinase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004396 hexokinase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0005536 glucose binding IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR025192 Succ_DH/fum_Rdtase_N 113 185
IPR017896 4Fe4S_Fe-S-bd 213 283
No external refs found!