lcl|LHPG02000007.1_cds_PRW57163.1_8834 (PRW57163)


Aliases : PRW57163

Description : Transmembrane E3 ubiquitin-ligase 1-like


Gene families : OG_01_0005343 (OrthoFinder) Phylogenetic Tree(s): OG0005343_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57163.1_8834
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_78672 78672 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR003689 ZIP 662 1048
No external refs found!