- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRW56996
Description : Choline transporter like family
Gene families : OG_01_0001567 (OrthoFinder) Phylogenetic Tree(s): OG0001567_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000007.1_cds_PRW56996.1_9010 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g278550 | 30778571 | No description available | 0.02 | OrthoFinder | |
| Cre14.g617800 | 30776086 | No description available | 0.02 | OrthoFinder | |
| Cz01g24180.t1 | No alias | Choline transporter-like [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_54745 | 54745 | Choline transporter-like [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01001248.1_cds_GFH18108.1_12585 | HaLaN_14852, GFH18108 | Choline transporter-like [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Enrichment |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Enrichment |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Enrichment |
| BP | GO:0006077 | (1->6)-beta-D-glucan metabolic process | IEP | Enrichment |
| BP | GO:0006078 | (1->6)-beta-D-glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0006470 | protein dephosphorylation | IEP | Enrichment |
| BP | GO:0006497 | protein lipidation | IEP | Enrichment |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Enrichment |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Enrichment |
| BP | GO:0006914 | autophagy | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| MF | GO:0008897 | holo-[acyl-carrier-protein] synthase activity | IEP | Enrichment |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Enrichment |
| MF | GO:0015923 | mannosidase activity | IEP | Enrichment |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Enrichment |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0016972 | thiol oxidase activity | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044042 | glucan metabolic process | IEP | Enrichment |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Enrichment |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007603 | Choline_transptr-like | 153 | 483 |
| No external refs found! |